BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015G04LP1|AL426898
(1033 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1338 326 7e-89
>3x_Contig1338
Length = 8134
Score = 326 bits (164), Expect = 7e-89
Identities = 236/252 (93%), Gaps = 8/252 (3%)
Strand = Plus / Plus
Query: 785 actgtcactgcagctatagctgcgtaaatnttttttcttttcttcttttcagaactttgt 844
||||||||||||||||||||| | || | | ||||||||||||||||||||||||||||
Sbjct: 1 actgtcactgcagctatagct-catac-tctattttcttttcttcttttcagaactttgt 58
Query: 845 tatgtcacggr--gggggctaatagcccactmcatctcttctcaatggagtccgattgac 902
|||||||||| | | |||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 59 tatgtcacggaatgtgcgctaatagcccact-catctcttctcaatggagttcgattgac 117
Query: 903 tgttccaatgattaacttattcaacaaactgaaatccacgacttggcaatttatttatga 962
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 118 tgttccaatgattaacttattcaacaaactgaaatccacgacttggcaattta-ttatga 176
Query: 963 ggaatttcaccccaacataagatgttgtcttgatag-aaaaaattgtataaatagatggg 1021
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 177 ggaatttcaccccaacataagatgttgtcttgatagaaaaaaattgtataaatagatggg 236
Query: 1022 ttt-atctgtaa 1032
||| ||||||||
Sbjct: 237 tttcatctgtaa 248
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9026
Number of Sequences: 1807
Number of extensions: 9026
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 1033
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1017
effective length of database: 10,329,639
effective search space: 10505242863
effective search space used: 10505242863
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)